# hmmsearch :: search profile(s) against a sequence database # HMMER 3.0 (March 2010); http://hmmer.org/ # Copyright (C) 2010 Howard Hughes Medical Institute. # Freely distributed under the GNU General Public License (GPLv3). # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - # query HMM file: Terpene_synth_N.hmm # target sequence database: Arabidopsis_lyrata.faa # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query: Terpene_synth_N-terminal [M=192] Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 2.6e-54 184.7 0.2 7.2e-54 183.2 0.0 1.8 2 XP_002872809.1 hypothetical protein ARALYDRAFT_352546 [Arabi 2.1e-49 168.7 0.0 4e-49 167.8 0.0 1.5 1 XP_002885048.1 predicted protein [Arabidopsis lyrata subsp. 7.1e-49 166.9 0.1 1.4e-48 166.0 0.0 1.5 1 XP_002878672.1 terpene synthase/cyclase family protein [Arab 4.3e-47 161.1 0.1 8.1e-47 160.2 0.1 1.4 1 XP_002875943.1 hypothetical protein ARALYDRAFT_348000 [Arabi 5.8e-47 160.7 0.3 5.8e-47 160.7 0.2 2.0 3 XP_002865341.1 terpene synthase/cyclase family protein [Arab 1.2e-46 159.7 1.8 1.6e-46 159.3 1.3 1.1 1 XP_002862915.1 hypothetical protein ARALYDRAFT_359284, parti 2.3e-46 158.8 0.4 4.4e-46 157.8 0.3 1.4 1 XP_002891454.1 predicted protein [Arabidopsis lyrata subsp. 5.8e-46 157.4 0.5 9.8e-46 156.7 0.3 1.4 1 XP_002891056.1 hypothetical protein ARALYDRAFT_890956 [Arabi 8.3e-46 156.9 0.6 1.5e-45 156.1 0.4 1.5 1 XP_002870550.1 predicted protein [Arabidopsis lyrata subsp. 1.2e-44 153.2 4.4 1.9e-44 152.5 2.3 1.9 2 XP_002870136.1 lyase/ magnesium ion binding protein [Arabido 5e-44 151.1 1.4 7.2e-44 150.6 1.0 1.2 1 XP_002885047.1 hypothetical protein ARALYDRAFT_341583 [Arabi 3.5e-43 148.4 4.3 6.4e-43 147.5 3.0 1.4 1 XP_002878732.1 predicted protein [Arabidopsis lyrata subsp. 2.3e-42 145.7 4.8 4.6e-42 144.7 3.3 1.5 1 XP_002870134.1 ATTPS03 [Arabidopsis lyrata subsp. lyrata] 7.9e-41 140.7 3.7 1.5e-40 139.8 2.6 1.5 1 XP_002875284.1 predicted protein [Arabidopsis lyrata subsp. 3e-40 138.8 1.6 5.8e-40 137.9 1.1 1.5 1 XP_002878731.1 myrcene/ocimene synthase [Arabidopsis lyrata 4.8e-40 138.1 0.8 3.1e-39 135.5 0.1 2.1 2 XP_002891456.1 predicted protein [Arabidopsis lyrata subsp. 5.9e-40 137.9 0.0 5.9e-40 137.9 0.0 2.1 3 XP_002887787.1 hypothetical protein ARALYDRAFT_477113 [Arabi 1.8e-37 129.7 2.4 3e-37 129.0 0.2 2.0 2 XP_002886523.1 linalool synthase [Arabidopsis lyrata subsp. 2e-35 123.0 0.1 3.8e-34 118.9 0.0 2.5 2 XP_002888108.1 hypothetical protein ARALYDRAFT_338258 [Arabi 5.2e-35 121.7 0.2 5.2e-35 121.7 0.2 2.0 1 XP_002888107.1 terpene synthase/cyclase family protein [Arab 9.1e-30 104.6 0.2 2.6e-29 103.1 0.1 1.7 1 XP_002863146.1 hypothetical protein ARALYDRAFT_332992 [Arabi 2.6e-24 86.8 1.5 3.6e-24 86.4 1.0 1.2 1 XP_002878733.1 hypothetical protein ARALYDRAFT_900932 [Arabi 6.4e-21 75.7 0.0 1.8e-19 71.0 0.0 2.6 2 XP_002865340.1 predicted protein [Arabidopsis lyrata subsp. 3.9e-06 27.5 0.2 4.6e-06 27.3 0.1 1.1 1 XP_002875282.1 hypothetical protein ARALYDRAFT_904750 [Arabi ------ inclusion threshold ------ 0.03 14.9 0.0 0.037 14.6 0.0 1.1 1 XP_002868508.1 predicted protein [Arabidopsis lyrata subsp. Domain annotation for each sequence (and alignments): >> XP_002872809.1 hypothetical protein ARALYDRAFT_352546 [Arabidopsis lyrata subsp. lyrata] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 183.2 0.0 5.5e-57 7.2e-54 1 191 [. 271 476 .. 271 477 .. 0.85 2 ? -2.5 0.1 4.9 6.4e+03 21 41 .. 675 695 .. 654 709 .. 0.46 Alignments for each domain: == domain 1 score: 183.2 bits; conditional E-value: 5.5e-57 --------------------------------......----------------------------------------------- CS Terpene_synth_N-terminal 1 dwgdvfllslkngslfnspsataealeeeaek......lkeevrkllkavpavypkdleekLelidtLqrLGisyhFeeeIkeiL 79 dw++ ++l+ ++gs++ sps+ta a++ ++++ l++ v++ +vp+v p+dl+e+++++d+LqrLGis++FeeeIke+L XP_002872809.1 271 DWEKLLKLQSQDGSFLFSPSSTAFAFM-QTRDsnclryLRNAVKRFNGGVPNVFPVDLFEHIWIVDRLQRLGISRYFEEEIKECL 354 7**********************99**.55555999999888888888************************************* PP -----------------.....---------------------------------------.--...------------------ CS Terpene_synth_N-terminal 80 deiyrsweekkseeeed.....dletvAlaFrLLRqhGydvssdvFkkFkdeegnfkesls.ed...vkgllsLYeAshlstege 155 d+++r+w++ k+ ++++ d++++A+aFrLLR hGy+vs dvFk+F++e + f +++ ++ ++g+++LY+As+l++++e XP_002872809.1 355 DYVHRYWTD-KGICWARcshvqDIDDTAMAFRLLRLHGYQVSADVFKNFEKEGE-F-FCFVgQSnqaATGMFNLYRASQLAFPRE 436 ********9.667787788899***************************96555.6.5666433567****************** PP ----------------------.--..---.--------- CS Terpene_synth_N-terminal 156 eiLeealsFtrkhLkeslseel.sd..esp.nlaeeVeha 191 +iL++a++F++k+L+ + ++++ d ++ +l e+ a XP_002872809.1 437 DILKNAKEFSNKYLQGKRERDElIDkwIIMkDLPGEIGFA 476 **************76444333222353333566666655 PP == domain 2 score: -2.5 bits; conditional E-value: 4.9 --------------------- CS Terpene_synth_N-terminal 21 ataealeeeaeklkeevrkll 41 ++++ e+ ++ ++ e++k++ XP_002872809.1 675 RRNDEKEKTIRSMETEMEKMV 695 222223333444444444444 PP >> XP_002885048.1 predicted protein [Arabidopsis lyrata subsp. lyrata] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 167.8 0.0 3.1e-52 4e-49 2 192 .] 71 249 .. 70 249 .. 0.88 Alignments for each domain: == domain 1 score: 167.8 bits; conditional E-value: 3.1e-52 -------------------------------.----------------------------------------------------- CS Terpene_synth_N-terminal 2 wgdvfllslkngslfnspsataealeeeaek.lkeevrkllkavpavypkdleekLelidtLqrLGisyhFeeeIkeiLdeiyrs 85 wgd+fl s+ + a+ + + +e+e +k++vr++l++++ + e+++li L +LGi+yhFe eI+eiL +++ + XP_002885048.1 71 WGDHFL-SVPLDV------AEFADFSREMEVtMKPKVRNMLMSSK----NGDNERIRLIYLLINLGIAYHFEIEIDEILGQAFGN 144 999999.666666......23477888888878********7443....55669******************************* PP ------------------------------------------------------------------------------------- CS Terpene_synth_N-terminal 86 weekkseeeeddletvAlaFrLLRqhGydvssdvFkkFkdeegnfkeslsedvkgllsLYeAshlstegeeiLeealsFtrkhLk 170 e++ ++++ dlet++++F ++R Gy++ +d+F +Fk e+g+fkesl+ed++g+l+LYeA+hl+t++e+i++ealsFtr hL+ XP_002885048.1 145 LEDMIAKQN--DLETISIMFEVFRLRGYYMPCDAFYRFKGEDGRFKESLAEDIRGMLQLYEAAHLGTPSEDIMDEALSFTRYHLE 227 999876554..*************************************************************************5 PP ---------------------- CS Terpene_synth_N-terminal 171 eslseelsdespnlaeeVehaL 192 +++ ++ ++sp+l+++++++L XP_002885048.1 228 SLIGHHAVSASPHLSKHIKNTL 249 5666555667889******987 PP >> XP_002878672.1 terpene synthase/cyclase family protein [Arabidopsis lyrata subsp. lyrata] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 166.0 0.0 1e-51 1.4e-48 1 192 [] 65 243 .. 65 243 .. 0.89 Alignments for each domain: == domain 1 score: 166.0 bits; conditional E-value: 1e-51 ------------------------------------------------------------------------------------- CS Terpene_synth_N-terminal 1 dwgdvfllslkngslfnspsataealeeeaeklkeevrkllkavpavypkdleekLelidtLqrLGisyhFeeeIkeiLdeiyrs 85 dwgd+fl +l + ++ ++l++e+++lk+++rk+l+ +++ +++++++ li L LG++yhFe+eI++ L++ +++ XP_002878672.1 65 DWGDHFL-RLPINV------SDMDTLTREMNALKPTIRKMLMYSQD--VEETKKRILLIYLLVALGVAYHFEDEIDDNLKHSFEK 140 6999999.455554......45699999*************85543..4566699****************************** PP ------------------------------------------------------------------------------------- CS Terpene_synth_N-terminal 86 weekkseeeeddletvAlaFrLLRqhGydvssdvFkkFkdeegnfkeslsedvkgllsLYeAshlstegeeiLeealsFtrkhLk 170 +e+ ++ e dl tv+++F+++R++Gy+ ssdvF++Fk ++g+f+++l+edvkgll LYeA++l+t++e+iL+ea+sF+++hL+ XP_002878672.1 141 IETIMAGEI--DLSTVSVMFWVFRTYGYNLSSDVFRRFKGKDGKFEKCLKEDVKGLLILYEATQLGTSTEDILDEAMSFASSHLE 223 *99765554..*************************************************************************5 PP ---------------------- CS Terpene_synth_N-terminal 171 eslseelsdespnlaeeVehaL 192 +l++ +++p++++ +++aL XP_002878672.1 224 CLLAGG--TCPPHISRLIRNAL 243 577755..4667*******998 PP >> XP_002875943.1 hypothetical protein ARALYDRAFT_348000 [Arabidopsis lyrata subsp. lyrata] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 160.2 0.1 6.2e-50 8.1e-47 26 192 .] 45 204 .. 27 206 .. 0.89 Alignments for each domain: == domain 1 score: 160.2 bits; conditional E-value: 6.2e-50 -----------------------------------------------------------------------.------------- CS Terpene_synth_N-terminal 26 leeeaeklkeevrkllkavpavypkdleekLelidtLqrLGisyhFeeeIkeiLdeiyrsweekkseeeed.dletvAlaFrLLR 109 ee++ lke+vr+ll+a+ +++ e+++lid+L rLGisyhFe eI + L++++ ++ ++ ++++ dl+tv+l F+++R XP_002875943.1 45 NEEKLSSLKETVRELLMAS----KEEPIENIKLIDALCRLGISYHFEGEIFAQLETMFGCHGFMQMIRDNEfDLYTVSLVFQVFR 125 4567888*********754....35666********************************999987887779************* PP ----------------------------------------------------------------------------------- CS Terpene_synth_N-terminal 110 qhGydvssdvFkkFkdeegnfkeslsedvkgllsLYeAshlstegeeiLeealsFtrkhLkeslseelsdespnlaeeVehaL 192 q Gy+ dvF++Fk+++g+fke+l+ed++gll LYeA+h st+ge+iL+eal+F+r hL e l+++ +sp+++ ++++aL XP_002875943.1 126 QFGYKLGVDVFNNFKNKDGKFKEHLAEDARGLLCLYEAAHWSTHGEDILDEALAFSRYHL-EGLTDQ---SSPHMSIRIKNAL 204 ************************************************************.766755...3668999999987 PP >> XP_002865341.1 terpene synthase/cyclase family protein [Arabidopsis lyrata subsp. lyrata] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 160.7 0.2 4.5e-50 5.8e-47 2 191 .. 23 202 .. 22 203 .. 0.88 2 ? -2.7 0.0 5.6 7.3e+03 16 41 .. 476 501 .. 458 514 .. 0.50 3 ? -3.2 0.0 7.9 1e+04 143 162 .. 528 547 .. 518 548 .. 0.83 Alignments for each domain: == domain 1 score: 160.7 bits; conditional E-value: 4.5e-50 ------------------------------------------------------------------------------------- CS Terpene_synth_N-terminal 2 wgdvfllslkngslfnspsataealeeeaeklkeevrkllkavpavypkdleekLelidtLqrLGisyhFeeeIkeiLdeiyrsw 86 wgd+fl+ +s + +ale+e++ lk++vr+ + +++ ++ +++++ i+ L +LG+syhFe+eI+e L++++++ XP_002865341.1 23 WGDQFLKFSMADS-------DFDALEREIKVLKPKVRENIFILSSRDKDAMKRTILSIHFLNSLGLSYHFEKEIEESLKHAFDEV 100 9999994222233.......3499************999987777788888899******************************9 PP ------------------------------------------------------------------------------------- CS Terpene_synth_N-terminal 87 eekkseeeeddletvAlaFrLLRqhGydvssdvFkkFkdeegnfkeslsedvkgllsLYeAshlstegeeiLeealsFtrkhLke 171 e+ ++e+ dl+t++ Fr++R++Gyd+ssdvF+kFk ++g+fke l edv+g+ls+YeA h++t++++iL+e Ft +hL e XP_002865341.1 101 EDLIADEN--DLYTISTIFRVFRTYGYDMSSDVFNKFKGDDGKFKEILIEDVRGMLSFYEAVHFGTTKDHILDETSCFTLNHL-E 182 99765554..*************************************************************************.7 PP -------------------- CS Terpene_synth_N-terminal 172 slseelsdespnlaeeVeha 191 l++ ++ ++p++++ +++a XP_002865341.1 183 PLATGRRVCPPHISKLIQNA 202 566555456669***99998 PP == domain 2 score: -2.7 bits; conditional E-value: 5.6 -------------------------- CS Terpene_synth_N-terminal 16 fnspsataealeeeaeklkeevrkll 41 +n+ t+e+ +e+ek++ +++k++ XP_002865341.1 476 MNEHGVTKEEANRELEKMNGDMNKIV 501 23333333333334444444444444 PP == domain 3 score: -3.2 bits; conditional E-value: 7.9 -------------------- CS Terpene_synth_N-terminal 143 sLYeAshlstegeeiLeeal 162 LY A ++ ++e +L+e + XP_002865341.1 528 VLYTADDVYNHREGKLQEYI 547 6999****99**99999976 PP >> XP_002862915.1 hypothetical protein ARALYDRAFT_359284, partial [Arabidopsis lyrata subsp. lyrata] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 159.3 1.3 1.2e-49 1.6e-46 2 192 .] 21 198 .. 18 198 .. 0.87 Alignments for each domain: == domain 1 score: 159.3 bits; conditional E-value: 1.2e-49 ------------------------------------------------------------------------------------- CS Terpene_synth_N-terminal 2 wgdvfllslkngslfnspsataealeeeaeklkeevrkllkavpavypkdleekLelidtLqrLGisyhFeeeIkeiLdeiyrsw 86 w d+f +++ + ++ + l +e+e+ k++vr+ + + +++ +++k+ i+ L +LG+syhFe+eI+e+L+e+++++ XP_002862915.1 21 WSDHFF-TVSITD------SDLDVLAREIEEFKPKVRENIFSL---SSDAIKRKILSIHLLINLGLSYHFENEIEETLKEAFEKI 95 656555.222222......2349999***********999544...458999********************************* PP ------------------------------------------------------------------------------------- CS Terpene_synth_N-terminal 87 eekkseeeeddletvAlaFrLLRqhGydvssdvFkkFkdeegnfkeslsedvkgllsLYeAshlstegeeiLeealsFtrkhLke 171 e+ ++e+ dl+t++++Fr++R++G+++ sdvF++Fk ++g+fkesl e+vkg+lsLYeA h++t+++++L+ea +Ft hL e XP_002862915.1 96 ENLIADEN--DLYTISIMFRVFRTYGHNMLSDVFNRFKGNNGEFKESLIENVKGMLSLYEAVHFGTTTDHMLDEASRFTLDHL-E 177 *9776554..*************************************************************************.6 PP -----------.---------- CS Terpene_synth_N-terminal 172 slseelsdesp.nlaeeVehaL 192 l++ + +++p ++ + +++aL XP_002862915.1 178 PLTTGH-TAIPlHILKLIRKAL 198 455443.578889*99999998 PP >> XP_002891454.1 predicted protein [Arabidopsis lyrata subsp. lyrata] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 157.8 0.3 3.4e-49 4.4e-46 2 184 .. 73 242 .. 72 249 .. 0.86 Alignments for each domain: == domain 1 score: 157.8 bits; conditional E-value: 3.4e-49 ------------------------------------------------------------------------------------- CS Terpene_synth_N-terminal 2 wgdvfllslkngslfnspsataealeeeaeklkeevrkllkavpavypkdleekLelidtLqrLGisyhFeeeIkeiLdeiyrsw 86 wg++fl s + + ++ eal +e+e+lk++vr+++k+ + k+++++ li L +LG+++hFe+eI++ +++ +++ XP_002891454.1 73 WGHQFL-SAHVDL------SEMEALGREIEALKPKVRDMFKSFKG--MKSNKKNFLLIYLLVSLGLAHHFEDEIEKSIKDDSQEM 148 999999.444444......3559999**************86654..4455589******************************9 PP ------------------------------------------------------------------------------------- CS Terpene_synth_N-terminal 87 eekkseeeeddletvAlaFrLLRqhGydvssdvFkkFkdeegnfkeslsedvkgllsLYeAshlstegeeiLeealsFtrkhLke 171 ee+++ e+ dl+tv++ F+++R++G+++ssdvF++Fk ++g+fke+l++d+kg+lsLYeA+h++t++++iL+ealsF+ ++Lk+ XP_002891454.1 149 EEMMAGEN--DLYTVSIIFWVFRTYGHNISSDVFNRFKGDNGKFKECLATDAKGILSLYEAAHMGTTTDYILDEALSFALSYLKS 231 99876665..*************************************************************************55 PP ------------- CS Terpene_synth_N-terminal 172 slseelsdespnl 184 ++++ ++pnl XP_002891454.1 232 LAASG--ICKPNL 242 44432..234455 PP >> XP_002891056.1 hypothetical protein ARALYDRAFT_890956 [Arabidopsis lyrata subsp. lyrata] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 156.7 0.3 7.5e-49 9.8e-46 2 192 .] 77 252 .. 76 252 .. 0.87 Alignments for each domain: == domain 1 score: 156.7 bits; conditional E-value: 7.5e-49 -------------------------------.----------------------------------------------------- CS Terpene_synth_N-terminal 2 wgdvfllslkngslfnspsataealeeeaek.lkeevrkllkavpavypkdleekLelidtLqrLGisyhFeeeIkeiLdeiyrs 85 wgd++l+ +++s + ++le+e+e +k++v+++l+++ +++ +e++ li+ L LG s++Fe+eI+eiLd+++++ XP_002891056.1 77 WGDHILSVPTENS-------EFDSLETEIESiIKPKVKNMLMSS----HNTDKERILLIHLLMCLGTSHYFEKEIEEILDQAFEK 150 9999994333333.......3388888999977********744....367779******************************* PP ------------------------------------------------------------------------------------- CS Terpene_synth_N-terminal 86 weekkseeeeddletvAlaFrLLRqhGydvssdvFkkFkdeegnfkeslsedvkgllsLYeAshlstegeeiLeealsFtrkhLk 170 ++ ++ eddlet+A++F ++R +G+++s+dvF++Fk +g+fk l +dv+g+l+LYe +hl t++e++++ealsFtr hL XP_002891056.1 151 LDSLIRD--EDDLETIAIMFEVFRLYGHQISCDVFDRFKGVDGKFKH-LVSDVRGILQLYEGAHLTTPSEDVMDEALSFTRYHL- 231 9986644..45**********************************65.99**********************************. PP ---------------------- CS Terpene_synth_N-terminal 171 eslseelsdespnlaeeVehaL 192 esl++++ + p++a+++ +aL XP_002891056.1 232 ESLAGQE-ATAPHMAQHILNAL 252 8888775.45679*****9998 PP >> XP_002870550.1 predicted protein [Arabidopsis lyrata subsp. lyrata] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 156.1 0.4 1.2e-48 1.5e-45 2 192 .] 73 249 .. 72 249 .. 0.88 Alignments for each domain: == domain 1 score: 156.1 bits; conditional E-value: 1.2e-48 ----------------------.---------.---------------------------------------------------- CS Terpene_synth_N-terminal 2 wgdvfllslkngslfnspsata.ealeeeaek.lkeevrkllkavpavypkdleekLelidtLqrLGisyhFeeeIkeiLdeiyr 84 wgd+fl sl+ ++ ++ +++e+e+e +k++vr+ l ++ ++++++k++li+ L +LGis++ e eI+ iL+++++ XP_002870550.1 73 WGDYFL-SLSVDD-------SEfDKIEREIESvMKPNVRDKLISS----HNSNKDKIRLIHLLISLGISHYIETEIEMILNQTFK 145 *****9.666666.......233889999999789***9999533....367779*****************************9 PP ------------------------------------------------------------------------------------- CS Terpene_synth_N-terminal 85 sweekkseeeeddletvAlaFrLLRqhGydvssdvFkkFkdeegnfkeslsedvkgllsLYeAshlstegeeiLeealsFtrkhL 169 + + see ddlet++++F ++R + +++s+d F +Fk ++g+fkesl dv+g+l+LY+A+hl+t++e+i+eea+sFtr++L XP_002870550.1 146 ELDGIISEE--DDLETISIMFEVFRLYQHKISCDTFVRFKGKDGRFKESLVADVRGMLQLYQAAHLGTPSEDIMEEAKSFTRNQL 228 988766444..5************************************************************************* PP ----------------------- CS Terpene_synth_N-terminal 170 keslseelsdespnlaeeVehaL 192 esl +++ +++p+l+ ++++aL XP_002870550.1 229 -ESLVTST-TIPPHLSSHIRNAL 249 .6566443.4555********98 PP >> XP_002870136.1 lyase/ magnesium ion binding protein [Arabidopsis lyrata subsp. lyrata] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 152.5 2.3 1.4e-47 1.9e-44 24 192 .] 16 181 .. 3 181 .. 0.86 2 ? -2.3 0.0 4.2 5.5e+03 105 130 .. 337 369 .. 334 380 .. 0.73 Alignments for each domain: == domain 1 score: 152.5 bits; conditional E-value: 1.4e-47 ------------------------------------------------------------------------------------- CS Terpene_synth_N-terminal 24 ealeeeaeklkeevrkllkavpavypkdleekLelidtLqrLGisyhFeeeIkeiLdeiyrsweekkseeeeddletvAlaFrLL 108 +++ e+a+ lkeevrk+l ++ + + e+Le+id+LqrLGisyh+++eI+eiL++i+++ e + e++dl++++l+F LL XP_002870136.1 16 AETAEKAKLLKEEVRKTLGEI-----EGTIEQLEMIDSLQRLGISYHYKHEIHEILKNIHDQRGEIVR--EAQDLHATSLEFFLL 93 445557778*********533.....45559*****************************99888543..345************ PP -----------------------------------------------------------------------...----...---- CS Terpene_synth_N-terminal 109 RqhGydvssdvFkkFkdeegnfkeslsedvkgllsLYeAshlstegeeiLeealsFtrkhLkeslseelsd...espn...laee 187 RqhG+dvs+d+F+ F e g f+++l++d+kgllsLYeAs++s +e +L++ + +++k L+e ++e++++ e + + e+ XP_002870136.1 94 RQHGFDVSQDAFDVFISETGVFRKTLCSDIKGLLSLYEASYFSKGSEFKLKDTRIYAKKRLSEFVAESSKTicrE--DetyIFEM 176 *************************************************************99988887655443..23459999 PP ----- CS Terpene_synth_N-terminal 188 VehaL 192 V++aL XP_002870136.1 177 VKRAL 181 99997 PP == domain 2 score: -2.3 bits; conditional E-value: 4.2 -------------.......------------- CS Terpene_synth_N-terminal 105 FrLLRqhGydvss.......dvFkkFkdeegnf 130 + +LR +G +v + d Fk F e + + XP_002870136.1 337 YDVLRDKGLNVIPylkqvwtDLFKTFLMEAKWY 369 678999999988766667778888887766655 PP >> XP_002885047.1 hypothetical protein ARALYDRAFT_341583 [Arabidopsis lyrata subsp. lyrata] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 150.6 1.0 5.5e-47 7.2e-44 2 171 .. 69 225 .. 68 237 .. 0.90 Alignments for each domain: == domain 1 score: 150.6 bits; conditional E-value: 5.5e-47 ------------------------------------------------------------------------------------- CS Terpene_synth_N-terminal 2 wgdvfllslkngslfnspsataealeeeaeklkeevrkllkavpavypkdleekLelidtLqrLGisyhFeeeIkeiLdeiyrsw 86 wgd+f s++ +s a+ ++le+e+++ k+ vr++l+++ +++ +ek+++i+ L ++GisyhF+++I+eiL++ +++ XP_002885047.1 69 WGDHFF-SVSLDS------AEFDELEREIKTTKPLVRDMLMSS----HSSDKEKIRFIHLLVSMGISYHFDKDIQEILNHSFTKL 142 999998.777777......34599999*************744....367779*******************************9 PP ------------------------------------------------------------------------------------- CS Terpene_synth_N-terminal 87 eekkseeeeddletvAlaFrLLRqhGydvssdvFkkFkdeegnfkeslsedvkgllsLYeAshlstegeeiLeealsFtrkhLke 171 e+ ++e +dlet++++F ++R +G+++s d+F++F+ ++g+fkesl++dv+g+l+L++ +hl+t++e+i++ea+sF+r+hL++ XP_002885047.1 143 EDIIDKE--NDLETISIMFEVFRLYGHKMSYDAFDRFRGKDGRFKESLATDVRGMLQLFQFAHLGTPSEDIMDEAMSFARNHLES 225 9965444..4*************************************************************************54 PP >> XP_002878732.1 predicted protein [Arabidopsis lyrata subsp. lyrata] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 147.5 3.0 4.9e-46 6.4e-43 2 192 .] 57 234 .. 56 234 .. 0.86 Alignments for each domain: == domain 1 score: 147.5 bits; conditional E-value: 4.9e-46 ----------------------------------------------------.-------------------------------- CS Terpene_synth_N-terminal 2 wgdvfllslkngslfnspsataealeeeaeklkeevrkllkavpavypkdle.ekLelidtLqrLGisyhFeeeIkeiLdeiyrs 85 w+++ lls++n++++ +++ ++e + lke+vrk+l+ +k+++ ++Le+id+Lq+LGisyhFe e + iL++ y++ XP_002878732.1 57 WDHHHLLSVENKYMK------DKSSVRERDLLKEKVRKMLN-----DKKKTYvDQLEFIDDLQKLGISYHFEAEMDIILTSSYQK 130 *************54......4444558999*********4.....2355555******************************99 PP ------------------------------------------------------------------------------.------ CS Terpene_synth_N-terminal 86 weekkseeeeddletvAlaFrLLRqhGydvssdvFkkFkdeegnfkeslsedvkgllsLYeAshlstegeeiLeeals.FtrkhL 169 ++ e +dl+++Al+FrL+RqhG +vs+dvF+ F++ g+f + +d+ g lsLYeAs+lst+++++L++ ++ F++++L XP_002878732.1 131 ERTN-VRE--SDLHATALEFRLFRQHGLNVSEDVFDVFMKICGKFGS---DDIYGFLSLYEASYLSTKSDTKLQKCIRpFATQQL 209 7763.333..4********************************8866...99***********************9988****** PP ----------.---.---------- CS Terpene_synth_N-terminal 170 keslseelsd.esp.nlaeeVehaL 192 ++ +++++++ + + ++ e+V ++L XP_002878732.1 210 RDFVDTHSNEnCGScDMVEMVVQTL 234 9999998844355557888887765 PP >> XP_002870134.1 ATTPS03 [Arabidopsis lyrata subsp. lyrata] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 144.7 3.3 3.5e-45 4.6e-42 2 192 .] 36 213 .. 35 213 .. 0.87 Alignments for each domain: == domain 1 score: 144.7 bits; conditional E-value: 3.5e-45 ------------------------------------------------------------------------------------- CS Terpene_synth_N-terminal 2 wgdvfllslkngslfnspsataealeeeaeklkeevrkllkavpavypkdleekLelidtLqrLGisyhFeeeIkeiLdeiyrsw 86 w++ +llsl n +++ +a+++e ++ lk+ev+k+l++ ++ l e+Lel+dtLqrLG+syhFe+eIk++L++++ ++ XP_002870134.1 36 WEHEYLLSLGNTYVK-----EADNIE-RVMLLKQEVSKMLNE-----TEGLLEQLELVDTLQRLGVSYHFEREIKKTLTNVHVKH 109 999999999999954.....556555.999**********53.....36777******************************999 PP ----------..------------------------------------------------------------------------- CS Terpene_synth_N-terminal 87 eekkseeeed..dletvAlaFrLLRqhGydvssdvFkkFkdeegnfkeslsedvkgllsLYeAshlstegeeiLeealsFtrkhL 169 + ++++ ++ dl+++Al+FrLLRqhG+++ +dv+++ ++ + +d+kg+lsLYeAs+lst+ +++L+e + +t+k L XP_002870134.1 110 VRAHQKRIDRweDLYATALEFRLLRQHGFSIAEDVLDRNIGDDL-----DDTDIKGILSLYEASYLSTRIDTKLKETICYTTKRL 189 887544444478*************************9987665.....3489******************************** PP -------------.---------- CS Terpene_synth_N-terminal 170 keslseelsdesp.nlaeeVehaL 192 ++ ++ ++s+++ +l+++V haL XP_002870134.1 190 RKFVEVNKSENKYyTLRRMVIHAL 213 **8888874434447*******98 PP >> XP_002875284.1 predicted protein [Arabidopsis lyrata subsp. lyrata] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 139.8 2.6 1.2e-43 1.5e-40 2 182 .. 56 225 .. 55 234 .. 0.84 Alignments for each domain: == domain 1 score: 139.8 bits; conditional E-value: 1.2e-43 ------------------------------------------------------------------------------------- CS Terpene_synth_N-terminal 2 wgdvfllslkngslfnspsataealeeeaeklkeevrkllkavpavypkdleekLelidtLqrLGisyhFeeeIkeiLdeiyrsw 86 w++ +lls++n+++ ++++++ + lk++vr++l v ++k+ e+Lelid+Lq+LG+syhFe +I+++L++++ ++ XP_002875284.1 56 WDHCYLLSIENKYA------SEKEVI-TRDVLKKKVRMMLD-V---EKKSRLEQLELIDDLQKLGVSYHFELQINDTLTDFHLKN 129 9***********93......455555.7899*********3.4...457777******************************999 PP ---..----------------------------------------------.----------------------------.---- CS Terpene_synth_N-terminal 87 eek..kseeeeddletvAlaFrLLRqhGydvssdvFkkFkdeegnfkesls.edvkgllsLYeAshlstegeeiLeeals.Ftrk 167 ++ k ++e+dl+++Al+FrLLRqhG+dvs+++F+ + d+ + +++++ + +kg++sLYeAs lst+++++L+++++ F+++ XP_002875284.1 130 GRNvwK-CDKEEDLHATALEFRLLRQHGFDVSENIFDVIIDKIE--SNTFKsNGIKGIISLYEASFLSTKSDTKLHKVIRpFATE 211 999743.33445****************************9777..33444389***********************9999**** PP --------------- CS Terpene_synth_N-terminal 168 hLkeslseelsdesp 182 ++++ +++e++++ + XP_002875284.1 212 QIRKFVDDETNNI-E 225 **99998776443.2 PP >> XP_002878731.1 myrcene/ocimene synthase [Arabidopsis lyrata subsp. lyrata] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 137.9 1.1 4.5e-43 5.8e-40 49 191 .. 5 145 .. 1 146 [. 0.87 Alignments for each domain: == domain 1 score: 137.9 bits; conditional E-value: 4.5e-43 -----.------------------------------------------------------------------------------- CS Terpene_synth_N-terminal 49 pkdle.ekLelidtLqrLGisyhFeeeIkeiLdeiyrsweekkseeeeddletvAlaFrLLRqhGydvssdvFkkFkdeegnfke 132 +k+++ ++Le+id+Lq+LGisyhFe eI++iL++ y++ ++ e +dl+++Al+FrL+RqhG +vs+dvF++F+++ g+f + XP_002878731.1 5 KKKTYvDQLEFIDDLQKLGISYHFEAEIDNILTSSYQKERTN-VRE--SDLHATALEFRLFRQHGLNVSEDVFDDFMKKCGKFGS 86 3555569*****************************997763.333..4********************************8876 PP -------------------------------.--------------.-----.--------- CS Terpene_synth_N-terminal 133 slsedvkgllsLYeAshlstegeeiLeeals.FtrkhLkeslseel.sdesp.nlaeeVeha 191 +d+ g lsLYeAs+lst+++++L++ ++ F++++L++ +++++ +d+ + ++ e+V ++ XP_002878731.1 87 ---DDIYGFLSLYEASYLSTKSDTKLQKCIRpFATQQLRDFVDTHSnEDCGScDMVEMVVET 145 ...99***********************9988******999999884445555788888766 PP >> XP_002891456.1 predicted protein [Arabidopsis lyrata subsp. lyrata] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 135.5 0.1 2.4e-42 3.1e-39 2 192 .] 71 242 .. 70 242 .. 0.89 2 ? 0.8 0.0 0.48 6.3e+02 20 70 .. 453 500 .. 434 517 .. 0.67 Alignments for each domain: == domain 1 score: 135.5 bits; conditional E-value: 2.4e-42 ------------------------------------------------------------------------------------- CS Terpene_synth_N-terminal 2 wgdvfllslkngslfnspsataealeeeaeklkeevrkllkavpavypkdleekLelidtLqrLGisyhFeeeIkeiLdeiyrsw 86 wg+ fl s + + ++ + l +e+e+lk+++r++l++++ +k++++k+ +i L +LG++ hFe+eI+e L++ r++ XP_002891456.1 71 WGHRFL-SAHVDF------SEMDVLGREIEALKPQMRDMLMSSK-GINKSSKKKILFIYLLVSLGLAFHFEDEIEESLKDGLREI 147 999999.455554......35599999*************8665.5678888********************************* PP ------------------------------------------------------------------------------------- CS Terpene_synth_N-terminal 87 eekkseeeeddletvAlaFrLLRqhGydvssdvFkkFkdeegnfkeslsedvkgllsLYeAshlstegeeiLeealsFtrkhLke 171 ee ++ e+ dl+tv++ F+++R++G+++ss ++g+fke+l++d+kg+lsLYeA+h++t++++iL+ealsFt + L e XP_002891456.1 148 EEIMAGED--DLYTVSIIFWVFRTYGHNISSG-------DNGKFKECLAKDAKGILSLYEAAHMGTTTDYILDEALSFTLSNL-E 222 *9876655..********************97.......8999****************************************.6 PP -----------.---------- CS Terpene_synth_N-terminal 172 slseelsdesp.nlaeeVehaL 192 sl+ + + + nl++++++aL XP_002891456.1 223 SLAASG--TCKlNLSRRIRKAL 242 666553..45568******998 PP == domain 2 score: 0.8 bits; conditional E-value: 0.48 ----------------------------------.----------------- CS Terpene_synth_N-terminal 20 sataealeeeaeklkeevrkllkavpavypkdle.ekLelidtLqrLGisyh 70 +++ea++ +++++ + +k+++ + k+++ k+ +idtL +sy XP_002891456.1 453 VTEEEAFR-KLHQMVADLDKMMN---EEFLKTIYyLKIFIIDTLRAANVSYE 500 34445555.66676677788885...33334555599999999988888775 PP >> XP_002887787.1 hypothetical protein ARALYDRAFT_477113 [Arabidopsis lyrata subsp. lyrata] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? -2.6 0.1 5 6.5e+03 24 44 .. 30 49 .. 15 59 .. 0.63 2 ! 137.9 0.0 4.5e-43 5.9e-40 1 192 [] 215 413 .. 215 413 .. 0.88 3 ? -2.8 0.1 5.9 7.7e+03 19 42 .. 706 731 .. 694 754 .. 0.55 Alignments for each domain: == domain 1 score: -2.6 bits; conditional E-value: 5 --------------------- CS Terpene_synth_N-terminal 24 ealeeeaeklkeevrkllkav 44 ++ + +e+ k+++rk+l +v XP_002887787.1 30 ANNV-SFEQTKDKIRKMLDKV 49 3333.5677888888888744 PP == domain 2 score: 137.9 bits; conditional E-value: 4.5e-43 --------------------------------......----------....--------------------------------- CS Terpene_synth_N-terminal 1 dwgdvfllslkngslfnspsataealeeeaek......lkeevrkllk....avpavypkdleekLelidtLqrLGisyhFeeeI 75 dw+ ++++++kngslf+sp+ ta+a++ ++++ l +ll+ avp+vyp d++++L+li tL++LGi++ F+ eI XP_002887787.1 215 DWDLIVKYQRKNGSLFDSPAITAAAFT-QFGNdgclryL----CSLLQkfeaAVPTVYPFDQYARLSLIVTLESLGIDRDFKTEI 294 69*************************.77777*95553....67777777899******************************* PP ---------------------...-----------------------------------------...----------------- CS Terpene_synth_N-terminal 76 keiLdeiyrsweekkseeeed...dletvAlaFrLLRqhGydvssdvFkkFkdeegnfkeslsed...vkgllsLYeAshlsteg 154 k+iLde+yr+w + + e+ +l t+AlaFrLL hGydvs d +k F++e+g f+ +l+ + ++l+L++A++ s++ XP_002887787.1 295 KSILDETYRYWLRGD----EEiclELATCALAFRLLLAHGYDVSYDPLKPFAEESG-FSDTLEGYvknTFSVLELFKAAQ-SYPH 373 ************953....22346*****************************999.98888755455889********9.8999 PP -------------------------.---.---------- CS Terpene_synth_N-terminal 155 eeiLeealsFtrkhLkeslseelsd.esp.nlaeeVehaL 192 e+ L++ s+t+++L+ +ls+ l++ + l++eVe aL XP_002887787.1 374 ESALKKQCSWTKQYLEMELSNWLKTsVRDkYLKKEVEDAL 413 ***************7799987755455557******998 PP == domain 3 score: -2.8 bits; conditional E-value: 5.9 -----..------------------- CS Terpene_synth_N-terminal 19 psata..ealeeeaeklkeevrkllk 42 +s+++ e+++ ae+ +ee +kl+ XP_002887787.1 706 SSKEEiiESMKALAERKREELHKLIL 731 22222246666666666666677664 PP >> XP_002886523.1 linalool synthase [Arabidopsis lyrata subsp. lyrata] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 129.0 0.2 2.3e-40 3e-37 29 181 .. 70 214 .. 48 224 .. 0.84 2 ? 0.5 0.2 0.56 7.3e+02 26 89 .. 229 289 .. 211 308 .. 0.61 Alignments for each domain: == domain 1 score: 129.0 bits; conditional E-value: 2.3e-40 -----.------------------------------------------------------------------------------- CS Terpene_synth_N-terminal 29 eaekl.keevrkllkavpavypkdleekLelidtLqrLGisyhFeeeIkeiLdeiyrsweekkseeeeddletvAlaFrLLRqhG 112 ++kl ++v+++l v+ +++d +e+Le+i+++q LGi+ +F++eI+++L++iy++ ++ + +dl +vAl+FrLLRq+G XP_002886523.1 70 YSHKLnIKKVKNIL--VS--NRDDPFENLEMINAIQGLGIDLYFRHEIDQTLHMIYKEPTHF----YGRDLREVALCFRLLRQEG 146 33443237899999..44..468889******************************997763....356**************** PP --------------------------------------------------------------------- CS Terpene_synth_N-terminal 113 ydvssdvFkkFkdeegnfkeslsedvkgllsLYeAshlstegeeiLeealsFtrkhLkeslseelsdes 181 y+v++++F+++ d++g ++ + ++dvk l++LYeAs+l++egee+L+ +++Ft ++L+e++s+++s+ + XP_002886523.1 147 YYVQESIFENILDKKGGLEDDPKNDVKVLIELYEASELRVEGEETLDGVRDFTFNCLNELCSGRKSH-Q 214 ******************99999**********************************9999877633.2 PP == domain 2 score: 0.5 bits; conditional E-value: 0.56 ----------------------------.------------------------------------ CS Terpene_synth_N-terminal 26 leeeaeklkeevrkllkavpavypkdle.ekLelidtLqrLGisyhFeeeIkeiLdeiyrsweek 89 + +++ + + ++++k + +++++ + L l+ ++ ++ +++ +ee ++i + + + ek XP_002886523.1 229 TLRRLTSI--RFMSMIKIAG--QEDKEWlQSLLLVAEIDSIRLKSLIQEEMSQIFKWWRELNLEK 289 33344444..5567776332..344444599**********999999999999888766665554 PP >> XP_002888108.1 hypothetical protein ARALYDRAFT_338258 [Arabidopsis lyrata subsp. lyrata] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 0.9 0.0 0.43 5.7e+02 59 87 .. 148 176 .. 145 185 .. 0.84 2 ! 118.9 0.0 2.9e-37 3.8e-34 9 173 .. 217 396 .. 209 413 .. 0.83 Alignments for each domain: == domain 1 score: 0.9 bits; conditional E-value: 0.43 ----------------------------- CS Terpene_synth_N-terminal 59 idtLqrLGisyhFeeeIkeiLdeiyrswe 87 ++ q+LG++ F+ +k++++++ ++ + XP_002888108.1 148 VELSQQLGLQFLFSTRVKQMIKTCSSNAK 176 66679****************99988765 PP == domain 2 score: 118.9 bits; conditional E-value: 2.9e-37 ------------------------......---------------------.--------------------------------- CS Terpene_synth_N-terminal 9 slkngslfnspsataealeeeaek......lkeevrkllkavpavypkdle.ekLelidtLqrLGisyhFeeeIkeiLdeiyrsw 86 ++gslf+spsata+a++ +++ l+ v+k ++vp++yp ++e kL +++ + ++G+ ++F eeI+++L +iy+s+ XP_002888108.1 217 GDSDGSLFQSPSATAAAYM-LSGNtkclayLQSLVQKCPHGVPQIYPLNEElIKLTMVNIIDNFGLGEYFGEEIDRFLLQIYKSH 300 5789***********9999.44444887776555666666***********99******************************98 PP ----------........-----------------------------------------....---------------------- CS Terpene_synth_N-terminal 87 eekkseeeed........dletvAlaFrLLRqhGydvssdvFkkFkdeegnfkeslsed....vkgllsLYeAshlstegeeiLe 159 e+++ e + +l++ +l+Fr+LR++Gydv + +F++F ++e+ ++ +l+++ + +ls+Y+ ++l ++ge +Le XP_002888108.1 301 EKEDVE---KmpiclqvdQLHKASLEFRMLRMNGYDVMPRSFCWFLNDEE-IRDHLETNieclFFVMLSVYRETDLIFPGECELE 381 885433...2357999999***************************8777.888888776777778******************* PP ------------.-- CS Terpene_synth_N-terminal 160 ealsFtrkhLke.sl 173 ea++F+rk+L + ++ XP_002888108.1 382 EAREFSRKLLDKsQF 396 **********88333 PP >> XP_002888107.1 terpene synthase/cyclase family protein [Arabidopsis lyrata subsp. lyrata] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 121.7 0.2 4e-38 5.2e-35 11 177 .. 235 415 .. 225 425 .. 0.84 Alignments for each domain: == domain 1 score: 121.7 bits; conditional E-value: 4e-38 ----------------------.....---------------------.------------------------------------ CS Terpene_synth_N-terminal 11 kngslfnspsataealeeeaek.....lkeevrkllkavpavypkdle.ekLelidtLqrLGisyhFeeeIkeiLdeiyrsweek 89 +gslf+spsata+a++ ++ l++ v+k ++vp+ yp ++ kL++++ +++ G+ + F eI+++L+++yr++eek XP_002888107.1 235 IDGSLFQSPSATASAFMLTRNTkclayLQNLVQKCPNGVPQKYPLNEDlIKLSMVNLIESTGLGEFFGIEIEHVLEQVYRHYEEK 319 5799*********999844444888887777777777**********999********************************997 PP -------......-----------------------------------------....--------------------------- CS Terpene_synth_N-terminal 90 kseeeed......dletvAlaFrLLRqhGydvssdvFkkFkdeegnfkeslsed....vkgllsLYeAshlstegeeiLeealsF 164 + e+ + +l++ +laFr+LR+hG dvs+ +F++F ++++ ++ +l+++ + +l++Y+A++l+++ge+ Leea+++ XP_002888107.1 320 DVERM-SmsyladQLHKDSLAFRMLRMHGRDVSPRSFCWFLNDQE-MRYQLERNidsfLLVILNVYRATDLMFPGENDLEEAREY 402 44333.35789999***************************8776.6777776655666779*********************** PP ------------- CS Terpene_synth_N-terminal 165 trkhLkeslseel 177 tr++Lk+s s ++ XP_002888107.1 403 TRNLLKNSRSINE 415 *****88655443 PP >> XP_002863146.1 hypothetical protein ARALYDRAFT_332992 [Arabidopsis lyrata subsp. lyrata] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 103.1 0.1 2e-32 2.6e-29 2 143 .. 22 152 .. 21 154 .. 0.88 Alignments for each domain: == domain 1 score: 103.1 bits; conditional E-value: 2e-32 ------------------------------------------------------------------------------------- CS Terpene_synth_N-terminal 2 wgdvfllslkngslfnspsataealeeeaeklkeevrkllkavpavypkdleekLelidtLqrLGisyhFeeeIkeiLdeiyrsw 86 w+d+fl s+ ++l + +++e+e lk+evr+ll+ ++ +++++k+ li+ L +LG++ hFe+eI++iL++++r+ XP_002863146.1 22 WTDYFL-SVPIDEL------ELGVITREIEILKPEVRELLS--SHGDDETSKRKVLLIQLLLSLGLAFHFENEINDILEHAFRKL 97 777777.5666653......34778899************4..5556677779*******************************9 PP --------------------------------------------------------- CS Terpene_synth_N-terminal 87 eekkseeeeddletvAlaFrLLRqhGydvssdvFkkFkdeegnfkeslsedvkglls 143 ++ ++e+ dl t++++Fr++R++G++ ss+vFk+F+ ++g+f++sl+ed+kg+ls XP_002863146.1 98 DDIIGDEK--DLSTISIMFRVFRTYGHNLSSNVFKRFTGDDGKFEQSLTEDAKGILS 152 99776554..*********************************************98 PP >> XP_002878733.1 hypothetical protein ARALYDRAFT_900932 [Arabidopsis lyrata subsp. lyrata] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 86.4 1.0 2.7e-27 3.6e-24 82 179 .. 63 158 .. 57 174 .. 0.80 Alignments for each domain: == domain 1 score: 86.4 bits; conditional E-value: 2.7e-27 ----------------------------------------------------------------------------------.-- CS Terpene_synth_N-terminal 82 iyrsweekkseeeeddletvAlaFrLLRqhGydvssdvFkkFkdeegnfkeslsedvkgllsLYeAshlstegeeiLeeals.Ft 165 i +++ + +++e+dl+++Al+F+L+RqhG++vs+dvF+ F+++ g+f++ +++++++sLYeAs+lst+++++L++ ++ F+ XP_002878733.1 63 IKNKYAKYRIDKHEKDLHATALEFQLFRQHGFNVSEDVFDVFMENCGKFES---NNINDIISLYEASYLSTKSNTQLQKLIRtFA 144 444444444445566********************************9977...99**********************98766** PP -------------- CS Terpene_synth_N-terminal 166 rkhLkeslseelsd 179 ++ L++ +++++++ XP_002878733.1 145 TQKLRDFVDTHSNE 158 ****9999988743 PP >> XP_002865340.1 predicted protein [Arabidopsis lyrata subsp. lyrata] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 3.4 0.0 0.072 94 2 65 .. 21 74 .. 18 74 .. 0.71 2 ! 71.0 0.0 1.4e-22 1.8e-19 115 192 .] 72 148 .. 69 148 .. 0.90 Alignments for each domain: == domain 1 score: 3.4 bits; conditional E-value: 0.072 ---------------------------------------------------------------- CS Terpene_synth_N-terminal 2 wgdvfllslkngslfnspsataealeeeaeklkeevrkllkavpavypkdleekLelidtLqrL 65 w d+f +++ + ++ + l +e+e+ k++vr+ + + +++ +++k+ i+ L +L XP_002865340.1 21 WSDHFF-TVSITD------SDLDVLAREIEEFKPKVRENIFSL---SSDAIKRKILSIHLLISL 74 555555.222222......2348999**********9999544...458888999999998766 PP == domain 2 score: 71.0 bits; conditional E-value: 1.4e-22 ------------------------------------------------------------------------------ CS Terpene_synth_N-terminal 115 vssdvFkkFkdeegnfkeslsedvkgllsLYeAshlstegeeiLeealsFtrkhLkeslseelsdespnlaeeVehaL 192 +s dvF++Fk ++g+fke+l e+vkg+lsLYeA h++t++++iL+ea +Ft hL e l++ ++ ++p+l + +++aL XP_002865340.1 72 ISLDVFNRFKGNNGEFKECLIENVKGMLSLYEAVHFGTTTDHILDEASRFTLDHL-EPLTTGHTAIPPHLLKLIRKAL 148 899****************************************************.655555445555*******998 PP >> XP_002875282.1 hypothetical protein ARALYDRAFT_904750 [Arabidopsis lyrata subsp. lyrata] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 27.3 0.1 3.5e-09 4.6e-06 17 77 .. 29 91 .. 17 95 .. 0.76 Alignments for each domain: == domain 1 score: 27.3 bits; conditional E-value: 3.5e-09 ----------------.......--------------------------------------------- CS Terpene_synth_N-terminal 17 nspsataealeeeaek.......lkeevrkllkavpavypkdleekLelidtLqrLGisyhFeeeIke 77 ++p a+++ l++++ + lk++v+++l +k+ e+Lel d+Lq+L syhFe +I++ XP_002875282.1 29 TTPDASSADLRRRSSNyqpsrdvLKKKVKMMLDV----VKKSRLEQLELMDDLQKL-FSYHFELQIND 91 45666666666666667777777*********53....447777************.8********86 PP >> XP_002868508.1 predicted protein [Arabidopsis lyrata subsp. lyrata] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 14.6 0.0 2.8e-05 0.037 83 126 .. 64 101 .. 53 113 .. 0.76 Alignments for each domain: == domain 1 score: 14.6 bits; conditional E-value: 2.8e-05 -------------------------------------------- CS Terpene_synth_N-terminal 83 yrsweekkseeeeddletvAlaFrLLRqhGydvssdvFkkFkde 126 +++ e + + + v l F LLR+ G +vs +v++ kd XP_002868508.1 64 FSECPE------DASFHVVKLLFLLLRTDGDKVSVEVMESVKDT 101 333222......2399************************9984 PP Internal pipeline statistics summary: ------------------------------------- Query model(s): 1 (192 nodes) Target sequences: 32549 (11744561 residues) Passed MSV filter: 1459 (0.0448247); expected 651.0 (0.02) Passed bias filter: 807 (0.0247934); expected 651.0 (0.02) Passed Vit filter: 98 (0.00301085); expected 32.5 (0.001) Passed Fwd filter: 25 (0.000768073); expected 0.3 (1e-05) Initial search space (Z): 32549 [actual number of targets] Domain search space (domZ): 25 [number of targets reported over threshold] # CPU time: 0.59u 0.00s 00:00:00.59 Elapsed: 00:00:00.20 # Mc/sec: 10841.13 //